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Gene Expression Data
      Default settings do not include RNA-Seq data; select assay type RNA-Seq to include.
Genes

Find expression data for...


One gene e.g., Shh or kit oncogene
Genes with similar nomenclature e.g., Hoxa*
List of genes e.g., Wnt1, Bmp7, En1, Isl1...
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OR
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A set of genes defined by
  • Function e.g., cell-cell signalling
  • Phenotype e.g., obese
  • Disease e.g., DiGeorge Syndrome
 

Genome location
Find expression data for a set of genes defined by
genomic interval(s) (genome build GRCm39).
e.g., Chr12:3000000-10000000
Anatomical structure or stage
Find assay results where expression is    

Anatomical Structures: AND / OR     Developmental Stages:

 
Use Theiler Stages
Use Ages (dpc)
Mutant / wild type
Find expression data in ...
Assay types

In situ assays Immunohistochemistry In situ reporter (knock in) RNA in situ hybridization Blot assays Northern blot Nuclease S1 RNase protection RT-PCR Western blot Whole genome assays RNA-Seq    Warning. Invalid Selection       Search for genes by expression profile. Select an Assay Type to activate the form. ☞ Classical Expression Assays Classical expression assays . Include: In situ assays Immunohistochemistry In situ reporter (knock in) RNA in situ hybridization Blot assays Northern blot RT-PCR Western blot VSports手机版.

Find genes where expression is: Show Theiler Stage selectors
Show Theiler Stage selectors ...

You can restrict your query to specific Theiler Stages for each structure specified. You can also query for stages without specifying a structure. NOTE: that when you toggle this button, previous stage specifications (if any) are discarded V体育安卓版. .

Detected Not
detected
NOT detected or analyzed in... NOT detected in...

The search will return genes whose expression was absent (not detected), as well as genes whose expression has not been analyzed or recorded in the database for the specified structure. V体育ios版.

The search will return genes whose expression is below the TPM cutoff value (<0 VSports最新版本. 5 TPM) for the specified structure. .

Anatomical Structure and/or Theiler Stage(s)
      Expression Profile Search limited to expression data from wild-type specimens.
  
Genes
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ID/Symbols List:      * tab, space, and newline separated ids   * limit input to 5000 ids/symbols |OR| Use IDs from a File File Type:    tab-delimited    comma separated ID/Symbols column:    * ID/Symbols parsed from a single column ID/Symbols File:       Results Filter expression by: Theiler Stage Anatomical System  Cell Type Assay Type  Detected.   TPM Level  Wild type.      Gene Type  Molecular Function  Biological Process  Cellular Component  Phenotype  Disease  Filtered by:  No filters selected. 0 result(s) match after applying filter(s)   Filter Large search returns make our pages slow to load. Therefore, some functionality has been disabled until you refine your search to bring the number of returned assay results under TBD V体育平台登录. Genes () Assays () V体育ios版 - Assay results () Images () Tissue x Stage Matrix Tissue x Gene Matrix "VSports app下载" Heat Map Export: Text File MGI Batch Query MouseMine Export: Text File Show Additional Sample Data Expression images in MGI are copyrighted; click on an image for details about their use. Theiler Stage   ➜ RNA-Seq Heat Map Export RNA-Seq search results to a heat map for visualization and analysis. Powered by: Morpheus.   Matrix Legend Number of expression results annotated as present in structure and/or substructures > 50 5-50 1-4 absent in structure > 20 5-20 1-4 Other Symbols structure has both present and absent results ambiguous in structure only absent or ambiguous results in substructures o tissue exists at Theiler stage (but has no annotations) tissue does not exist at this stage no annotations for the gene in this tissue Click on a grid cell to access annotation details and images. Filter Use gray checkboxes to select rows/columns for filtering more details Matrix Legend Number of expression results annotated as present in structure and/or substructures > 50 5-50 1-4 absent in structure > 20 5-20 1-4 Other Symbols structure has both present and absent results ambiguous in structure only absent or ambiguous results in substructures o tissue exists at Theiler stage (but has no annotations) tissue does not exist at this stage no annotations for the gene in this tissue Click on a grid cell to access annotation details and images. Filter Use gray checkboxes to select rows/columns for filtering more details Too many RNA-Seq results for export to heat map. Please refine your search to bring total RNA-Seq results under 10,000,000.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/07/2025
MGI 6.24
The Jackson Laboratory