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Review
. 2016 Nov 1;9(4):67.
doi: 10.3390/ph9040067.

"V体育2025版" pH Dependent Antimicrobial Peptides and Proteins, Their Mechanisms of Action and Potential as Therapeutic Agents

Affiliations
Review

"V体育2025版" pH Dependent Antimicrobial Peptides and Proteins, Their Mechanisms of Action and Potential as Therapeutic Agents

"VSports手机版" Erum Malik et al. Pharmaceuticals (Basel). .

Abstract

Antimicrobial peptides (AMPs) are potent antibiotics of the innate immune system that have been extensively investigated as a potential solution to the global problem of infectious diseases caused by pathogenic microbes. A group of AMPs that are increasingly being reported are those that utilise pH dependent antimicrobial mechanisms, and here we review research into this area. This review shows that these antimicrobial molecules are produced by a diverse spectrum of creatures, including vertebrates and invertebrates, and are primarily cationic, although a number of anionic examples are known. Some of these molecules exhibit high pH optima for their antimicrobial activity but in most cases, these AMPs show activity against microbes that present low pH optima, which reflects the acidic pH generally found at their sites of action, particularly the skin. The modes of action used by these molecules are based on a number of major structure/function relationships, which include metal ion binding, changes to net charge and conformational plasticity, and primarily involve the protonation of histidine, aspartic acid and glutamic acid residues at low pH. The pH dependent activity of pore forming antimicrobial proteins involves mechanisms that generally differ fundamentally to those used by pH dependent AMPs, which can be described by the carpet, toroidal pore and barrel-stave pore models of membrane interaction. A number of pH dependent AMPs and antimicrobial proteins have been developed for medical purposes and have successfully completed clinical trials, including kappacins, LL-37, histatins and lactoferrin, along with a number of their derivatives. Major examples of the therapeutic application of these antimicrobial molecules include wound healing as well as the treatment of multiple cancers and infections due to viruses, bacteria and fungi VSports手机版. In general, these applications involve topical administration, such as the use of mouth washes, cream formulations and hydrogel delivery systems. Nonetheless, many pH dependent AMPs and antimicrobial proteins have yet to be fully characterized and these molecules, as a whole, represent an untapped source of novel biologically active agents that could aid fulfillment of the urgent need for alternatives to conventional antibiotics, helping to avert a return to the pre-antibiotic era. .

Keywords: antimicrobial peptides and proteins; invertebrates; pH dependent antimicrobial activity; vertebrates. V体育安卓版.

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Conflict of interest statement

The authors declare no conflict of interest.

Figures

Figure 1
Figure 1
Models for the membrane pore formation by E2EM. Figure 1 was revised from [115] and Figure 1A shows models for pore formation by E2EM, which are the toroidal pore and barrel stave mechanisms (Table 1) and are the best supported experimentally. In both models, the N-terminal 23 residues of the peptide spans the bilayer and a glycine kink orientates the 7 residue, C-terminal Rana box region of E2EM to lie parallel to the membrane surface. In this orientation, the Rana box region of the peptide, which is a cystein stabilized macrocyclic structure, interacts with the lipid head-group region of the membrane and stabilizes pore formation by E2EM [115]. The major difference between these models is that in the toroidal pore mechanism, the membrane leaflets deform to allow the lipid head-group region to remain in contact with the hydrophilic face of the E2EM membrane spanning region, which is not observed in the barrel stave mechanism [23]. For clarity, two monomers of E2EM are shown in the schematic pore above but oligomers formed by between five and ten peptide molecules have been proposed [115,120]. Similar models of membrane interaction appear to apply to the linear reduced form of the peptide [115], which is represented in our studies as E2EM-lin. Figure 1B,C show two-dimensional axial projections [126] for the membrane spanning region and Rana box domain of E2EM, respectively, that are involved in pore formation by the peptide. In both cases, these segments for amphipilic α-helices with wide hydrophobic faces that our data suggest would be maximized by alkaline pH, thereby promoting the potential for the mutual interaction of E2EM monomers and the formation of multimeric species involved in pore formation.
Figure 2
Figure 2
Similarities between the structures of psoriasin and amoebapore A. Figure 2 was revised from [35] and shows human psoriasin (A) and amoebapore A from the protozoa, Entamoeba histolytica (B). It can be clearly seen that these peptides show structural similarities and both have been shown to possess pH dependent mechanisms of antimicrobial activity that is enhanced by acid conditions [34,35,36,79,80,81,83]. In particular, psoriasin possesses a histidine residue in its C-terminal region [127] similarly to amoebapore A [82] and based on these similarities, it can be speculated that the enhanced antibacterial action of psoriasin at low pH may involve a histidine mediated increased ability for pore formation and oligomerisation.
Figure 3
Figure 3
The pH of airway surface liquid and the pathogenesis of cystic fibrosis. Figure 3 was revised from [165] and shows a scheme for how changes in airway surface liquid (ASL) pH may influence the pathogenesis of cystic fibrosis (CF). In CF, the loss of cystic fibrosis transmembrane conductance regulator (CFTR) function results in decreased HCO3 conductance across airway epithelial cells and leads to low pH in the ASL. Under these pH conditions, ASL AMPs, such as LL-37, HNP-1, HBD-1 and lactoferrin, and antimicrobial proteins, such as lysozyme, surfactant protein A and surfactant protein D, have reduced activity. Lower pH also leads to the increased viscosity of mucins, decreased ciliary beat frequency, impaired phagocyte function and depleted ASL volume. These effects lead to a decrease in the antimicrobial efficacy of the ASL and subsequently contribute to increased respiratory infections in the CF airway, caused by both viral and bacterial pathogens [165,166,179,185].

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