Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The . gov means it’s official. Federal government websites often end in . gov or . mil. Before sharing sensitive information, make sure you’re on a federal government site VSports app下载. .

Https

The site is secure V体育官网. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely. .

Review
. 2015 Dec:24 Pt 3:185-96.
doi: 10.1016/j.margen.2015.08.007.

Origin, dynamics, and implications of extracellular DNA pools in marine sediments

Affiliations
Free article
Review

Origin, dynamics, and implications of extracellular DNA pools in marine sediments

Andrea Torti (V体育安卓版) et al. Mar Genomics. 2015 Dec.
Free article

Abstract

In marine sediments, DNA occurs both inside and outside living organisms. DNA not enclosed in living cells may account for the largest fraction of total DNA, and include molecules locked within dead cells, organic and inorganic aggregates, adsorbed onto mineral matrices, and viral DNA. This DNA comprises genetic material released in situ from sediment microbial communities, as well as DNA of pelagic and terrestrial origin deposited to the seafloor. DNA not enclosed in living cells undermines the assumption of a direct link between the overall DNA pool and the local, currently living microbial assemblages, in terms of both microbial cell abundance and diversity VSports手机版. At the same time, the extracellular DNA may provide an integrated view of the biodiversity and ecological processes occurring on land, in marine water columns, and sediments themselves, thereby acting as an archive of genetic information which can be used to reconstruct past changes in source environments. In this review, we identify and discuss DNA pools in marine sediments, with special focus on DNA not enclosed in living cells, its origin, dynamics, and ecological and methodological implications. Achievements in deciphering the genetic information held within each DNA pool are presented along with still-standing challenges and major gaps in current knowledge. .

Keywords: Ancient DNA; Extracellular RNA; Fossil DNA; Microbial diversity; Non-soluble DNA; Soluble DNA. V体育安卓版.

PubMed Disclaimer

LinkOut - more resources