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. 2013 Apr 23;8(4):e62157.
doi: 10.1371/journal.pone.0062157. Print 2013.

Clostridium difficile is an autotrophic bacterial pathogen

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Clostridium difficile is an autotrophic bacterial pathogen

Michael Köpke et al. PLoS One. .

Abstract

During the last decade, Clostridium difficile infection showed a dramatic increase in incidence and virulence in the Northern hemisphere. This incessantly challenging disease is the leading cause of antibiotic-associated and nosocomial infectious diarrhea and became life-threatening especially among elderly people. It is generally assumed that all human bacterial pathogens are heterotrophic organisms, being either saccharolytic or proteolytic VSports手机版. So far, this has not been questioned as colonization of the human gut gives access to an environment, rich in organic nutrients. Here, we present data that C. difficile (both clinical and rumen isolates) is also able to grow on CO2+H2 as sole carbon and energy source, thus representing the first identified autotrophic bacterial pathogen. Comparison of several different strains revealed high conservation of genes for autotrophic growth and showed that the ability to use gas mixtures for growth decreases or is lost upon prolonged culturing under heterotrophic conditions. The metabolic flexibility of C. difficile (heterotrophic growth on various substrates as well as autotrophy) could allow the organism in the gut to avoid competition by niche differentiation and contribute to its survival when stressed or in unfavorable conditions that cause death to other bacteria. This may be an important trait for the pathogenicity of C. difficile. .

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Conflict of interest statement

Competing Interests: MK is employed by LanzaTech. There are no patents, products in development or marketed products to declare V体育安卓版. This does not alter the authors’ adherence to all the PLOS ONE policies on sharing data and materials, as detailed online in the guide for authors.

VSports手机版 - Figures

Figure 1
Figure 1. Wood-Ljungdahl pathway and involved genes of C. difficile 630.
ACS, acetyl-CoA synthase; CODH, carbon monoxide dehydrogenase; CoFeS, corrinoid-iron-sulfur protein; THF, tetrahydrofolate.
Figure 2
Figure 2. Genetic arrangement of Wood-Ljungdahl-pathway genes in C. ljungdahlii and C. difficile: (a) Alignment of C. ljungdahlii and C. difficile 630 and (b) alignment of sequenced C. difficile strains against each other.
Sequence identity is represented by colored graphs above the alignments, variations and gaps to the consensus sequence are highlighted in black above the respective sequences. Locus numbers are given for annotated sequences. acs, genes for the CODH/ACS complex; acsA, CODH subunit gene; acsB, ACS subunit gene; acsC, CoFeS large subunit gene; acsD, CoFeS small subunit gene; acsE, methyltransferase subunit gene; cooC, gene for CODH accessory protein; fchA, formimimo-THF cyclodeaminase gene; fdx, ferredoxin gene; fhs, formyl-THF synthetase gene; folD, bifunctional methylene-THF dehydrogenase/formyl-THF cyclohydrolase gene; gcvH, gene for glycine cleavage system H protein; lpdA, gene for dihydrolipoamide dehydrogenase; metF, methylene-THF reductase gene; X, hypothetical gene.
Figure 3
Figure 3. Growth of various C. difficile strains in chemically defined acetogenic media under autotrophic and heterotrophic conditions.
Red squares, CO as sole carbon and energy source; Blue circles, CO2+H2 as sole carbon and energy source; Green triangles up, glucose and fructose as substrates; Black triangles down, control (N2). (a) C. difficile clinical isolate 630 (ATCC BAA-1382™), (b) C. difficile type strain DSM 1296, (c) acetogenic isolate DSM 12056, (d) acetogenic isolate DSM 12057. Error bars represent standard deviation.

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